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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
CITLA Citrullus lanatus 3654
CITME Citrus medica 171251
CITSI Citrus sinensis 2711
CLAGO Cladocopium goreaui SCF055-01 2562237
CLAOK Cladosiphon okamuranus S strain 309737
CLOKL Clostridium kluyveri DSM 555 431943
CLOPE Clostridium perfringens ATCC 13124 195103
CLOSPM68 Closterium sp. NIES-68 (minus strain) 2019903
CLOSPP67 Closterium sp. NIES-67 (plus strain) 2790670
COCNU Cocos nucifera 13894
COCSP Coccomyxa subellipsoidea C-169 574566
COFCA Coffea canephora 49390
COILA Coix lacryma-jobi 4505
COLORtrCO Coleochaete orbicularis 3124
COLORtrJU Coleochaete orbicularis 3124
COLPS Colwellia psychrerythraea 34H 167879
COLSPtr Coleochaete sp. 42110
COPCI Coprinopsis cinerea 5346
CORCA Corchorus capsularis 210143
COROL Corchorus olitorius 93759
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