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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
STRCO Streptomyces coelicolor A3 214689
STRAV Streptomyces avermitilis MA-4680 227882
STRAS Striga asiatica 4170
STAAU Staphylococcus aureus subsp. aureus NCTC 8325 93061
SPISP Spirogyra Sp. 3181
SPIPU Spizellomyces punctatus 109760
SPIPRtrTI Spirogyra pratensis 332123
SPIPRtrPO Spirogyra pratensis 332123
SPIPRtrJU Spirogyra pratensis 332123
SPIPO Spirodela polyrhiza 29656
SPIOL Spinacia oleracea 3562
SPIMU Spirogloea muscicola 2576442
SPHTH Sphaerobacter thermophilus DSM 20745 479434
SPHFA Sphagnum fallax 53036
SPHAR Sphaeroforma arctica 72019
SPHAL Sphingopyxis alaskensis RB2256 317655
SPASU Spatholobus suberectus 455371
SORBIRT Sorghum bicolor 4558
SOLTU Solanum tuberosum 4113
SOLPI Solanum pimpinellifolium 4084
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