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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
CITCL Citrus clementina 85681
CIOIN Ciona intestinalis 7719
CINKA Cinnamomum kanehirae 337451
CICRE Cicer reticulatum 90898
CICAR Cicer arietinum 3827
CHRZO Chromochloris zofingiensis 31302
CHRTO Chrysochromulina tobin CCMP291 1460289
CHRPA Chrysochromulina parva Lackey 127563
CHRIN Chrysanthemum indicum 146995
CHRAU Chrysoparadoxa australica 2498842
CHRAR Chrysiogenes arsenatis DSM 11915 118005
CHOLI Chordaria linearis 64904
CHOCR Chondrus crispus 2769
CHLVU Chlorella vulgaris 3077
CHLVA Chlorella variabilis 554065
CHLTR Chlamydia trachomatis A/HAR-13 315277
CHLSP Chlorella sp. A99 2041167
CHLSO Chlorella sorokiniana DOE1412 3076
CHLSC Chlamydomonas schloesseri CCAP 11/173 2026947
CHLRE Chlamydomonas reinhardtii 3055
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