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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
PETMO Petrotoga mobilis SJ95 403833
PETIN Petunia integrifolia subsp. inflata 4102
PETAX Petunia axillaris 33119
PERMA Persephonella marina EX-H1 123214
PERAM Persea americana 3435
PENMAtr Penium margaritaceum 102169
PENMA Penium margaritaceum 102169
PELSP Pelagophyceae sp. CCMP2097 v1.0 1982007
PAVSPCC Pavlovales sp. CCMP2436 v1.0 483367
PARTE Paramecium tetraurelia 5888
PARIM Paraphysomonas imperforata CCMP1604 v1.4 37642
PAPSO Papaver somniferum 3469
PANVI Panicum virgatum 38727
PANMI Panicum miliaceum 4540
PANGI Panax ginseng 4054
OSTTA Ostreococcus tauri RCC1115 v1.0 70448
OSTSP Ostreococcus sp. RCC809 385169
OSTLU Ostreococcus lucimarinus 242159
ORYSAJA Oryza sativa (spp. japonica) 4530
ORYSAIN Oryza sativa (spp. indica) 4530
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