Responsive image

TAP Subfamily: RKD

According to (Chardin et al., 2014), the plant specific RWP-RK TF Family can be divided into the two subfamilies NLP (NIN-like proteins) and RKD (RWP-RK domain proteins). Proteins belonging to the subfamily NLP provide an additional PB1 (Phox and Bem 1) domain at their C-terminus (Chardin et al., 2014; Wu et al., 2020). RWP-RK proteins are involved in response to nitrate availability and in nodule interception (Wu et al., 2020).


References:

Chardin, C., Girin, T., Roudier, F., Meyer, C., & Krapp, A. (2014). The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development. Journal of Experimental Botany, 65(19), 5577–5587. https://doi.org/10.1093/jxb/eru261

Wu, Z., Liu, H., Huang, W., Yi, L., Qin, E., Yang, T., Wang, J., & Qin, R. (2020). Genome-Wide Identification, Characterization, and Regulation of RWP-RK Gene Family in the Nitrogen-Fixing Clade. Plants, 9(9), 1178. https://doi.org/10.3390/plants9091178

Name: RKD
Class: TF
Number of species containing the TAP: 507 (list)
Number of available proteins: 4153
Domain rules :

TAP distribution:
Minimum Maximum Average Median
1 305 8.1913214990138 6

Download phylogenetic tree (Newick format):

View NJ Tree
View ML Tree

All data and services offered on this site are © copyrighted. Distribution via internet or other media is prohibited.
TAPscan logo created by Debbie Maizels