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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
SOLPE Solanum pennellii 28526
SOLME Solanum melongena 4111
SOLLY Solanum lycopersicum 4081
SOLL1 Solanum lycopersicoides 142760
SOLCH Solanum chilense 4083
SOLC1 Solanum chacoense 4108
SOLAE Solanum aethiopicum 205524
SISIR Sisymbrium irio 3730
SIRGR Siraitia grosvenorii 190515
SINME Sinorhizobium meliloti 1021 266834
SIMCH Simmondsia chinensis 3999
SHIFL Shigella flexneri 2a str. 301 198214
SETVI Setaria viridis 4556
SETIT Setaria italica 4555
SESIN Sesamum indicum 4182
SEMRO Seminavis robusta D6 568900
SELMO Selaginella moellendorffii 88036
SELLE Selaginella lepidophylla 59777
SEDAL Sedum album 23029
SCYPR Scytosiphon promiscuus (M) 1403536
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