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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
THEAC Thermoplasma acidophilum DSM 1728 273075
THAPS Thalassiosira pseudonana 35128
THAPE Thalassospira permensis NBRC 106175 1353532
THAOC Thalassiosira oceanica CCMP1005 637379
TETTH Tetrahymena thermophila 5911
TETST Tetraselmis striata 3165
TETSO Tetrabaena socialis 47790
TETOB Tetradesmus obliquus UTEX B 72 v1.0 3088
TETDE Tetradesmus deserticola SNI-2 v1.0 2780016
TECGR Tectona grandis 41396
TARKO Taraxacum kok-saghyz 333970
TARHA Tarenaya hassleriana 228870
TAKLE Takakia lepidozioides 37425
SYNSP Synechocystis sp. PCC 6803 1148
SYNEL Synechococcus elongatus PCC 7942 1140
SYMRE Symbiochloris reticulata Spain reference genome v1.0 40981
SYMMI Symbiodinium microadriaticum CCMP2467 2951
SULSO Sulfolobus solfataricus P2 273057
SULDE Sulfurimonas denitrificans DSM 1251 326298
SUAAR Suaeda aralocaspica 224144
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