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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
SULSO Sulfolobus solfataricus P2 273057
SYMMI Symbiodinium microadriaticum CCMP2467 2951
SYMRE Symbiochloris reticulata Spain reference genome v1.0 40981
SYNEL Synechococcus elongatus PCC 7942 1140
SYNSP Synechocystis sp. PCC 6803 1148
TAKLE Takakia lepidozioides 37425
TARHA Tarenaya hassleriana 228870
TARKO Taraxacum kok-saghyz 333970
TECGR Tectona grandis 41396
TETDE Tetradesmus deserticola SNI-2 v1.0 2780016
TETOB Tetradesmus obliquus UTEX B 72 v1.0 3088
TETSO Tetrabaena socialis 47790
TETST Tetraselmis striata 3165
TETTH Tetrahymena thermophila 5911
THAOC Thalassiosira oceanica CCMP1005 637379
THAPE Thalassospira permensis NBRC 106175 1353532
THAPS Thalassiosira pseudonana 35128
THEAC Thermoplasma acidophilum DSM 1728 273075
THEAM Thermovibrio ammonificans HB-1 648996
THEAT Thermodesulfatator atlanticus DSM 21156 1123371
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