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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
TRISU Trifolium subterraneum cv. Woogenellup 709039
TRIPR Trifolium pratense 57577
TRIMI Tribonema minus 303371
TRIAE Triticum aestivum 4565
TRESP Trebouxia sp. A1-2 2608996
TREPA Treponema pallidum subsp. pallidum str. Sea 81-4 1095955
TOXGO Toxoplasma gondii 5811
THLAR Thlaspi arvense 13288
THIIN Thiomonas intermedia 926
THEVO Thermoplasma volcanium GSS1 273116
THETR Thecamonas trahens 529818
THETH Thermodesulfovibrio thiophilus DSM 17215 1123376
THERO Thermomicrobium roseum DSM 5159 309801
THEPA Thellungiella parvula 98039
THEMA Thermotoga maritima MSB8 243274
THEIN Thermodesulfatator indicus DSM 15286 667014
THEHA Thellungiella halophila 98038
THECA Theobroma cacao 3641
THEAT Thermodesulfatator atlanticus DSM 21156 1123371
THEAM Thermovibrio ammonificans HB-1 648996
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