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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
SELLE Selaginella lepidophylla 59777
SELMO Selaginella moellendorffii 88036
SEMRO Seminavis robusta D6 568900
SESIN Sesamum indicum 4182
SETIT Setaria italica 4555
SETVI Setaria viridis 4556
SHIFL Shigella flexneri 2a str. 301 198214
SIMCH Simmondsia chinensis 3999
SINME Sinorhizobium meliloti 1021 266834
SIRGR Siraitia grosvenorii 190515
SISIR Sisymbrium irio 3730
SOLAE Solanum aethiopicum 205524
SOLC1 Solanum chacoense 4108
SOLCH Solanum chilense 4083
SOLL1 Solanum lycopersicoides 142760
SOLLY Solanum lycopersicum 4081
SOLME Solanum melongena 4111
SOLPE Solanum pennellii 28526
SOLPI Solanum pimpinellifolium 4084
SOLTU Solanum tuberosum 4113
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