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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
PYRFU Pyrococcus furiosus DSM 3638 186497
PYRGR Magnaporthe grisea 148305
PYRYE Pyropia yezoensis (Porphyra yezoensis) 2788
QUERO Quercus robur 38942
QUESU Quercus suber 58331
RADGU Raddia guianensis 1482630
RAPRA Raphanus raphanistrum 109996
RAPSA Raphanus sativus 3726
RAPSU Raphidocelis subcapitata 307507
RHIET Rhizobium etli CFN 42 347834
RHIIR Rhizophagus irregularis 588596
RHIOR Rhizopus oryzae 64495
RHOCR Rhodiola crenulata 242839
RHODE Rhododendron delavayi 321363
RHOMA Rhodopirellula maiorica SM1 1265738
RHOPA Rhodopseudomonas palustris CGA009 258594
RHORU Rhodospirillum rubrum ATCC 11170 269796
RHOSP Rhodobacter sphaeroides 2.4.1 272943
RHOWI Rhododendron williamsianum 262921
RICCO Ricinus communis 3988
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