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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
PROMA Prochlorococcus marinus str. MIT 9313 74547
PRUAV Prunus avium 42229
PRUDU Prunus dulcis 3755
PRUMU Prunus mume 102107
PRUPE Prunus persica 3760
PSEFL Pseudomonas fluorescens F113 1114970
PSEMU Pseudo-nitzschia multiseries CLN-47 635002
PSESP Pseudomonas savastanoi pv. phaseolicola 1448A 264730
PSESS Pseudomonas syringae pv. syringae B728a 205918
PSEST Pseudomonas syringae pv. tomato str. DC3000 223283
PSYCR Psychrobacter cryohalolentis K5 335284
PTEAQ Psychrobacter cryohalolentis K5 335284
PTEST Pterocarya stenoptera 91225
PUCTE Puccinellia tenuiflora 240906
PYLLI Pylaiella littoralis 2885
PYRAB Pyrococcus abyssi GE5 272844
PYRAE Pyrobaculum aerophilum str. IM2 178306
PYRBE Pyrus betulifolia 436086
PYRBR Pyrus bretschneideri 225117
PYRCO Pyrus communis 23211
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