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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
NOSPU Nostoc punctiforme PCC 73102 63737
NOSSP Nostoc sp. PCC 7120 103690
NYMCO Nymphaea colorata 210225
NYMTH Nymphaea thermarum 419125
NYSSI Nyssa sinensis 561372
OCHS1 Ochromonas sp. CCMP1393 v1.4 420556
OCHSP Ochromonadaceae sp. CCMP2298 v1.0 483371
OCITE Ocimum tenuiflorum 204149
OLEEU Olea europaea var. sylvestris 158386
OLYLA Olyra latifolia 38716
OROTH Oropetium thomaeum 1148796
ORYBA Oryza barthii 65489
ORYBR Oryza brachyantha 4533
ORYGL Oryza glaberrima 4538
ORYGR Oryza meyeriana var. granulata 110450
ORYME Oryza meridionalis 40149
ORYPU Oryza punctata 4537
ORYRU Oryza rufipogon 4529
ORYSAIN Oryza sativa (spp. indica) 4530
ORYSAJA Oryza sativa (spp. japonica) 4530
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