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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
MEDSA Medicago sativa 3879
MEDTR Medicago truncatula 3880
MESEN Mesotaenium endlicherianum 184485
MESLO Mesorhizobium loti MAFF303099 266835
MESSP Chelativorans sp. BNC1 266779
MESVI Mesostigma viride 41882
MESVICC Mesostigma viride CCAC 1140 41882
MESVINI Mesostigma viride NIES-296 41882
MESVItrCO Mesostigma viride 41882
MESVItrJU Mesostigma viride 41882
METAC Methanosarcina acetivorans C2A 188937
METCU Metallosphaera cuprina Ar 4 1006006
METJA Methanocaldococcus jannaschii DSM 2661 243232
METME Methylomonas methanica MC09 857087
MICC1 Micractinium conductrix 554055
MICCO Micromonas commoda 296587
MICPUCC Micromonas pusilla CCMP1545 564608
MICPURC Micromonas pusilla RCC299 296587
MIKMI Mikania micrantha 192012
MIMGU Mimulus guttatus 4155
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