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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
LEPFE Leptospirillum ferrooxidans C2-3 1162668
LEPIN Leptospira interrogans serovar Lai str. 56601 189518
LEPME Lepidium meyenii 153348
LINUS Linum usitatissimum 4006
LISMO Listeria monocytogenes EGD-e 169963
LOLPE Lolium perenne 4522
LONJA Lonicera japonica 105884
LOTJA Lotus japonicus 34305
LUFAE Luffa aegyptiaca 3670
LUPAL Lupinus albus 3870
LUPAN Lupinus angustifolius 3871
MACCO Macleaya cordata 56857
MAGM1 Magnetococcus marinus MC-1 156889
MAGMA Magnetospirillum magneticum AMB-1 342108
MALBA Malus baccata 106549
MALDO Malus domestica 3750
MALOL Malania oleifera 397392
MANES Manihot esculenta 3983
MARPA Marchantia paleacea 56867
MARPO Marchantia polymorpha 3197
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