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Species Table

This is a table of all species included in TAPscan v4. Protein names (e.g. in the phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. These lettercodes are listed in the table below.


5 Letter Code Species Name NCBI TaxID Actions
ORYRU Oryza rufipogon 4529
ORYPU Oryza punctata 4537
ORYME Oryza meridionalis 40149
ORYGR Oryza meyeriana var. granulata 110450
ORYGL Oryza glaberrima 4538
ORYBR Oryza brachyantha 4533
ORYBA Oryza barthii 65489
OROTH Oropetium thomaeum 1148796
OLYLA Olyra latifolia 38716
OLEEU Olea europaea var. sylvestris 158386
OCITE Ocimum tenuiflorum 204149
OCHSP Ochromonadaceae sp. CCMP2298 v1.0 483371
OCHS1 Ochromonas sp. CCMP1393 v1.4 420556
NYSSI Nyssa sinensis 561372
NYMTH Nymphaea thermarum 419125
NYMCO Nymphaea colorata 210225
NOSSP Nostoc sp. PCC 7120 103690
NOSPU Nostoc punctiforme PCC 73102 63737
NITMItrUP Nitella mirabilis 231897
NITMItrLO Nitella mirabilis 231897
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